Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880724.1_cds_XP_016437579.1_33326
CDS Infomation

[gene=LOC107763602] [db_xref=GeneID:107763602] [protein=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like] [protein_id=XP_016437579.1] [location=complement(join(9441..9809,9898..10099,10188..10438,10559..10664,10742..10908,10996..11076,11200..11363,11448..11839,11908..12035,12359..12446,12535..12884))] [gbkey=CDS]
Sequence

ATGGCATCTCACATTGTTGGATACCCCCGTATGGGCCCAAAGAGAGAGCTCAAATTTGCT
CTTGAGTCTTTCTGGGATGGAAAGAGCAGCGCTGAGGACTTGAAGAAGGTGTCTGCTGAC
CTCAGGTCATCCATCTGGAAACAGATGGCTGATGCTGGTATTAAGTACATTCCCAGCAAC
ACCTTCTCTTACTATGATCAAGTGCTCGACACAACCGCAATGCTTGGTGCCGTCCCTTCT
AGGTACAACTGGACCAGTGGTGAGATCGGGTTCGGCACTTACTTCTCCATGGCCAGAGGA
AATGCCTCCGTCCCTGCTATGGAGATGACAAAGTGGTTTGACACCAACTACCACTTCATT
GTCCCTGAGTTGGGACCTGATGTTAACTTTTCTTATGCTTCTCACAAGGCAGTAGATGAG
TACAAAGAGGCGAAGGGGCTTGGAGTAGATACTGTTCCAGTACTTGTTGGTCCAGTTTCA
TACTTGTTGCTTTCCAAACCTGCTAAGGGTGTTGAGAAATCTTTCCCCCTGTTGTCACTT
CTGGACAAAATCCTTCCAATTTACAAGGAAGTTATTGCGGAGTTGAAGGCAGCTGGCGCT
TCTTGGATTCAGCTTGACGAACCTACGCTTGTGTTGGATCTAGAGGCTCACAAATTGGAA
GCATTCACCAAGGCCTATGCTGACCTAGAGTCATCTCTATCTGGCCTTAATGTTATCGTT
GAGACCTACTTTGCTGACGTTCCTGCTGAGGCATTCAAAACCCTCACTGCTTTGAAAGGA
GTTACCGGATTTGGCTTTGACTTGGTCCGTGGAACTCAGACCCTCGATTTAATCAAGGGT
GGTTTCCCTTCCGGCAAGTACTTGTTTGCTGGAGTTGTTGACGGAAGGAACATTTGGGCT
AATGATCTTGCTGCATCTCTTAACCTCCTGCAATCTCTTGAGGGCATTGTAGGAAAAGAC
AAGCTTGTTGTCTCTACATCTTGCTCCCTACTCCACACTGCTGTTGATCTAGTCAATGAG
CCAAAGCTAGACGATGAAATCAAATCATGGCTCGCATTTGCTGCCCAAAAGGTTGTTGAA
GTAAATGCTTTAGCCAAGGCATTGGCTGGTGCCAAGGATGAGGCATTTTTCTCTGCCAAT
GCTGCTGCTCAAGCTTCCAGAAAGTCCTCCCCAAGAGTGACAAATGAAGCTGTTCAAAAG
GCTTCCGCTGCTCTTCAAGGATCTGACCACCACCGTGCTACAAATGTTAGTGCTAGACTT
GATGCCCAACAAAAGAAACTTAACCTACCAATTCTGCCTACAACCACCATTGGATCCTTC
CCTCAGACAGTGGAGCTTAGAAGAGTTCGTCGTGAATACAAGGCCAAGAAGATCTCCGAG
GAGGAATATGTTAAAGCCATCAAGGAGGAAATCAAGAAGGTTGTCGATCTCCAAGAAGAG
CTTGACATTGATGTCTTGGTTCACGGAGAGCCTGAGAGGAACGATATGGTTGAGTACTTT
GGAGAGCAGCTATCTGGTTTTGCCTTCACTGCTAATGGATGGGTTCAATCGTATGGATCT
CGATGTGTGAAGCCACCTATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACTGTC
TTCTGGTCCTCAGCTGCTCAGAATATGACCAAGAGGCCAATGAAGGGAATGCTTACCGGC
CCTGTCACCATTCTCAACTGGTCTTTTGTCAGAAATGACCAGCCAAGGTTTGAGACCTGC
TACCAGATTGCATTGGCCATTAAGGATGAAGTGGAGGATTTGGAGAAGGCAGGAATCACT
GTGATCCAAATCGATGAAGCTGCTTTGAGAGAAGGCTTGCCTCTGAGGAAGTCTGAACAC
GCATTCTACTTGAATTGGGCTGTCCACTCCTTCAGAATCACCAACGTCGGCATCCAGGAC
ACTACACAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCCATC
ATCGACATGGATGCTGATGTGATCACCATCGAGAACTCACGTTCTGATGAGAAACTCCTC
TCAGTTTTCAGGGAGGGAGTGAAGTACGGAGCTGGCATTGGTCCCGGTGTCTATGACATC
CACTCTCCAAGAATACCATCCACAGAGGAGATAGCCGATAGAGTTAACAAGATGCTTGCA
GTTCTTGACACCAACATCTTGTGGGTCAACCCCGACTGTGGTCTCAAGACTCGCAAGTAT
ACCGAGGTGAAACCAGCCCTGCAAAACATGGTGTCTGCAGCCAAGTCCATCCGCACTCAG
CTTGCCAGTGCCAAGTGA

Peptide Sequence

PEP ID

XP_016437579.1
PEP Infomation

PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Nicotiana tabacum]
Sequence

MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVSADLRSSIWKQMADAGIKYIPSN
TFSYYDQVLDTTAMLGAVPSRYNWTSGEIGFGTYFSMARGNASVPAMEMTKWFDTNYHFI
VPELGPDVNFSYASHKAVDEYKEAKGLGVDTVPVLVGPVSYLLLSKPAKGVEKSFPLLSL
LDKILPIYKEVIAELKAAGASWIQLDEPTLVLDLEAHKLEAFTKAYADLESSLSGLNVIV
ETYFADVPAEAFKTLTALKGVTGFGFDLVRGTQTLDLIKGGFPSGKYLFAGVVDGRNIWA
NDLAASLNLLQSLEGIVGKDKLVVSTSCSLLHTAVDLVNEPKLDDEIKSWLAFAAQKVVE
VNALAKALAGAKDEAFFSANAAAQASRKSSPRVTNEAVQKASAALQGSDHHRATNVSARL
DAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEEYVKAIKEEIKKVVDLQEE
LDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTV
FWSSAAQNMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGIT
VIQIDEAALREGLPLRKSEHAFYLNWAVHSFRITNVGIQDTTQIHTHMCYSNFNDIIHSI
IDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKMLA
VLDTNILWVNPDCGLKTRKYTEVKPALQNMVSAAKSIRTQLASAK

Transcript Sequence

Gene sequence data has not been registered.